v3.4 ยท Long-read support now in GA

Scalable sequence analysis,
built for research teams.

GenoSeq runs reproducible alignment, assembly, and variant-calling pipelines on managed cloud infrastructure โ€” so your lab can go from FASTQ to insight without babysitting a cluster.

2.4 Pb
sequencing processed
18 min
avg. WGS turnaround
99.98%
pipeline uptime
4,100+
labs onboarded

Everything you need to go from reads to results

A complete toolkit for genomics workflows, from raw basecalling to annotated variant reports โ€” all versioned, all reproducible.

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Pipeline builder

Compose BWA, minimap2, GATK, and DeepVariant steps into shareable, parameterized workflows with one click.

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Autoscaling compute

Elastic GPU and CPU pools spin up per run. Pay only for the wall-clock minutes your samples actually use.

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QC & reporting

MultiQC-style dashboards, coverage plots, and VCF summaries generated automatically for every completed run.

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Compliant by default

HIPAA- and GDPR-aligned controls, encryption at rest, and full audit logs across every dataset and job.

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Reproducible runs

Every analysis is pinned to exact tool versions and reference genomes. Rerun any job and get byte-identical output.

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Collaboration

Share projects with collaborators, set fine-grained permissions, and publish results to your lab group in one click.

A familiar workflow, end to end

From upload to annotated report, GenoSeq handles orchestration so you can focus on the biology.

Step 01

Ingest

Upload FASTQ/BAM or pull directly from your sequencer or SRA.

Step 02

Align

Short- and long-read alignment against GRCh38 or custom references.

Step 03

Call

Germline and somatic variant calling with ensemble consensus.

Step 04

Annotate

ClinVar, gnomAD, and VEP annotation with filterable reports.

Run your next analysis in minutes

Free tier includes 50 GB of processing and 100 GB of storage. No credit card to start.

Create a free account