Industry-standard tools, wrapped in a managed, reproducible runtime. Pick a workflow, point it at your data, and let GenoSeq handle orchestration, scaling, and reporting.
BWA-MEM2 and minimap2 for short and long reads, with automatic duplicate marking and sorting.
GATK HaplotypeCaller, DeepVariant, and Strelka2 with ensemble consensus for germline and somatic calls.
SPAdes, Flye, and hifiasm assemblies with HiC scaffolding and BUSCO quality assessment.
FastQC, MultiQC, and custom coverage/Q-metrics rolled into a single interactive report.
VEP- and ANNOVAR-based annotation against ClinVar, gnomAD, dbSNP, and custom panels.
WDL and Nextflow-compatible runtime with retry, caching, and scatter-gather out of the box.
Start free. Upgrade when your sample volume grows.
$0
50 GB processing / month · 100 GB storage · Community support.
$290 / mo
2 TB processing · 1 TB storage · Priority queues · Shared projects.
Custom
Dedicated compute · SSO & audit logs · On-prem option · 24/7 support.
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